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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914187.1_cds_XP_016464216.1_57276
CDS Infomation

[gene=LOC107787193] [db_xref=GeneID:107787193] [protein=leucoanthocyanidin dioxygenase-like] [protein_id=XP_016464216.1] [location=join(18278..18783,19833..20166,20507..20755)] [gbkey=CDS]
Sequence

ATGAGTTGCTTGCAAAGTTGGCCGGAGCCAATTGTCCGAGTTCAAGCACTGTCCGAAAGT
GGCATTCAAGAAATCCCCGACCGTTTCATTAAACGGCCAGCGGATAGACCATGTTTAATT
GAAACAACTCATGTTAAGGAAGCCAACAATAATATTCCATTGATTGACCTCAAAAACCTG
AAGTCATCCAAGGAATCTGTTCGCTCTGAAACTATGAAACTCATTTTCGAGGCTTGTCGC
GACTGGGGTTTTTTCCAAGTGGTGAATCATGGCGTTAGCCATGACCTGATGGCAAAAACT
CGCGGTGTTTGGCGCGAGTTTTTTCATCTTCCTTTGGAGGAGAAACAGAAATTTGCAAAT
TCTCCGATTACGTATGAAGGGTACGGCAGTCGGCTAGGAGTAGAGAAAGGTGGCAAATTG
GATTGGAGTGATTATTTCTTCCTTCATTTTCTTCCTGAGCCATTGAGGGATGAGAAAAAA
TGGCCTTATCTTCCGATTTCATGCAGAAAAATTGTTGCTGAATACGGACAAGAAGTAGTG
AAACTTTGTGAAAGAATATTGAAGATTTTATCCTTAAACCTAGGATTAGATGAGGATTAT
CTACACCATAAGTTTGGAGGGGACAGTGAAAGAGGTGCATGTTTAAGGGCAAATTTTTAC
CCAAAGTGTCCACAACCAGACTTAACACTAGGCCTCTCTTCGCACTCTGATCCTGGTGGC
ATGACCCTTCTCCTCCCTGATATTGACGTCGCCGGCCTCCAAGTCCGCCGTGACAATAAT
TGGTTAACCGTTAAACCAGTTCCTAATGCCTTCATTGTCAACATTGGGGATCAAATTCAG
GTATTAAGCAATGCAATGTACAAGAGTGTAGAGCACAGAGTAATCGTCAATTCGGCCAAA
GAACGTGTTTCCTTAGCATTCTTCTTCAATCCAGGAGGTGACAAACTCATTAAACCTGCA
GATGAGCTTGTGACAGAGGACCGGCCGGCGTTATATTTTCCGACGACGTTCAATAAGTAC
CGAGCTTTAATTAGAACTAAGGGACCTTGTGGCAAATCTCAAATTGAATCACTAAAATCT
CCAAGATAA

Peptide Sequence

PEP ID

XP_016464216.1
PEP Infomation

PREDICTED: leucoanthocyanidin dioxygenase-like [Nicotiana tabacum]
Sequence

MSCLQSWPEPIVRVQALSESGIQEIPDRFIKRPADRPCLIETTHVKEANNNIPLIDLKNL
KSSKESVRSETMKLIFEACRDWGFFQVVNHGVSHDLMAKTRGVWREFFHLPLEEKQKFAN
SPITYEGYGSRLGVEKGGKLDWSDYFFLHFLPEPLRDEKKWPYLPISCRKIVAEYGQEVV
KLCERILKILSLNLGLDEDYLHHKFGGDSERGACLRANFYPKCPQPDLTLGLSSHSDPGG
MTLLLPDIDVAGLQVRRDNNWLTVKPVPNAFIVNIGDQIQVLSNAMYKSVEHRVIVNSAK
ERVSLAFFFNPGGDKLIKPADELVTEDRPALYFPTTFNKYRALIRTKGPCGKSQIESLKS
PR

Transcript Sequence

Gene sequence data has not been registered.